ColiFormer is a transformer-based model for codon optimization of protein sequences in Escherichia coli. Built on top of CodonTransformer (a multi-species BigBird model trained on over 1 million ...
kentsislab/proteomegenerator3 is a bioinformatics pipeline that can be used to create sample-specific, proteogenomics search databases from long-read RNAseq data. It takes in a samplesheet and aligned ...
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